大分子和凝聚态系统的量子分块方法新进展

2023.10.09

投稿:龚惠英部门:理学院浏览次数:

活动信息

报告题目(Title):大分子和凝聚态系统的量子分块方法新进展(Recent Advances in Quantum Fragmentation Approach to Large Molecules and Condensed-Phase Systems)

报告人(Speaker):何晓 教授(华东师范大学)

报告时间(Time):2023年10月12日(周四) 18:00

报告地点(Place):校本部J202方润华讲堂

邀请人(Inviter):李永乐 副教授

主办部门:理学院物理系

摘要(Abstract):

The major computational limitation of conventional ab initio methods is the scaling problem, because the cost of ab initio calculation scales as nth power or worse with the system size. In the past two decades, the fragmentation method has opened a new door for the development of quantum mechanical (QM) methods and their applications to large molecules. In this talk, I will describe the electrostatically embedded generalized molecular fractionation with conjugate caps (EE-GMFCC) method we recently developed for QM applications on biomolecular systems. By introducing the electrostatic embedding field for each fragment calculation and reducing the computational cost for long-range two-body QM interactions, the EE-GMFCC approach is capable of accurately reproducing the molecular properties (such as dipole moment, electron density, and electrostatic potential), the total energy, and electrostatic solvation energy from full system QM calculations for proteins. The EE-GMFCC method has been applied for protein structure optimization, vibrational spectrum calculation, protein-ligand binding affinity prediction, protein NMR chemical shift calculation, and ab initio molecular dynamics simulation of large systems.